BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026H08LP1|AL428628
(875 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig848 891 0.0
3x_Contig419 480 e-135
>3x_Contig848
Length = 3091
Score = 891 bits (447), Expect = 0.0
Identities = 600/655 (91%)
Strand = Plus / Plus
Query: 1 gatcaatggctgcattggctaaccaaggttctttaccaaagatttttggttacattgaca 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 gatccatggctgcattggctaaccaaggttctttaccaaagatttttggttacattgaca 105
Query: 61 gaaccggtagaccattggtcggtattgtggtgacttgcgtctttggtttgctatccttca 120
|||||||||||||||||||||||||| | || ||||| |||||||||||| |||||||||
Sbjct: 106 gaaccggtagaccattggtcggtattattgtcacttgtgtctttggtttgttatccttca 165
Query: 121 ttgctgcatctccaaaggaaggtgaagtattcgactggttattggcgttgtctggtttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 ttgctgcatctccaaaggaaggtgaagtattcgactggttattggcgttgtctggtttgt 225
Query: 181 cctctttgtttacatggggtggtattttgctttgtcacatcagagttagaagagctttgg 240
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 226 cctctttgtttacatggggtggtatcatgctttgtcacatcagagttagaagagctttgg 285
Query: 241 ctgcacaaaacagaaccactgctgaactcagtttcactgcaccaactgatgtatggggtt 300
| ||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||
Sbjct: 286 ccgcacaaaacagaaccactgctgaactcagtttcaccgcaccaactggtgtatggggtt 345
Query: 301 ccgtgtacagcttgatcctaattatattaattttvatagcccaattctggatcgctttgt 360
|||| ||| | || | | ||||| || || || || ||||||||||||||||||||||
Sbjct: 346 ccgtatacggtttcgtattgattattttgatcttgatggcccaattctggatcgctttgt 405
Query: 361 tcccaattggtggtaaaccgagtgctgcagcattcttcgaagcttacttatctttcccaa 420
|||||||||||| |||||| ||||| | || ||||||||||||||| |||| |||||||
Sbjct: 406 tcccaattggtgataaaccaagtgcatctgccttcttcgaagcttacctatcgttcccaa 465
Query: 421 tttacatcgtattctacatcggtcataagayctggaagamaaactggaagttgttcatca 480
| | || | |||||||||||||| |||| |||||||| ||||||||||||||| ||||
Sbjct: 466 tcttgattgcgttctacatcggtcacaagatctggaagaaaaactggaagttgtttatca 525
Query: 481 aagcttcggatattgatattgattctggtagaagagaaactgacatcgaagctttgaagc 540
||| | |||||||||| ||| |||||||||||||||||||||||||||||||||| |
Sbjct: 526 gagccaagaatattgatatcgatactggtagaagagaaactgacatcgaagctttgaaac 585
Query: 541 aagavattgccgaagaaaaggcttttmtcgcttccaaaccattctactacagaatgtaca 600
|||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 586 aagaaattgccgaagaaaaggcttttatcgcttccaaaccattctactacagaatgtaca 645
Query: 601 agtkctggtgttgaataccagtattaacgaatgctaatcgagaagggctgagccc 655
||| |||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 646 agttctggtgttgaataccagtattaacgaatgctaattgggaagggctgagccc 700
>3x_Contig419
Length = 1943
Score = 480 bits (241), Expect = e-135
Identities = 258/261 (98%), Gaps = 2/261 (0%)
Strand = Plus / Minus
Query: 1 gatcaatggctgcattggctaaccaaggttctttaccaaagatttttggttacattgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatcaatggctgcattggctaaccaaggttctttaccaaagatttttggttacattgaca 202
Query: 61 gaaccggtagaccattggtcggtattgtggt-gacttgcgtctttggtttgctatccttc 119
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 gaaccggtagaccattggtcggtattgtggtcgacttgcgtctttggtttgctatccttc 142
Query: 120 attgctgcatctccaaaggaaggtgaagtattcgactggttattggcgttgtctggtttg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 attgctgcatctccaaaggaaggtgaagtattcgactggttattggcgttgtctggtttg 82
Query: 180 tcctctttgtttacatggggtggtattttgctttgtcacatcagagttagaagagctttg 239
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 81 tcctctttgtttacatggggtggtattttgctatgtcacatcagagttagaagagctttg 22
Query: 240 gct-gcacaaaacagaaccac 259
||| |||||||||||||||||
Sbjct: 21 gctggcacaaaacagaaccac 1
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6040
Number of Sequences: 1807
Number of extensions: 6040
Number of successful extensions: 46
Number of sequences better than 1.0e-20: 2
length of query: 875
length of database: 10,358,551
effective HSP length: 16
effective length of query: 859
effective length of database: 10,329,639
effective search space: 8873159901
effective search space used: 8873159901
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)